Preheat the oven to 350 degrees F. Line a cupcake pan with paper cupcake liners.
Place the ⅓ cup of vegan buttery spread in a small bowl. Microwave for about 20 seconds until it is melted. Set aside.
Place the melted buttery spread, sugar, and applesauce in a mixing bowl and mix well.
Add the flour, unsweetened cocoa powder, baking soda, and salt.
Add the water, chopped cherries, vanilla extract, and vinegar, and mix on medium speed until combined.
If the batter seems too thick or dry, add more liquid. Some gluten free flours really soak up the liquid, so adjust the amount if needed.
Spoon the batter into the cupcake liners, filling them about half full.
Bake at 350 degrees F for 20-23 minutes, or until a toothpick inserted inside comes out clean. Allow the cupcakes to cool somewhat in the pan before moving them to a wire rack.
Repeat with remaining batter (you will have enough for 3 or 4 more cupcakes).